BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A10LP1|AL428656
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1737 0.0
>3x_Contig1769
Length = 25795
Score = 1737 bits (876), Expect = 0.0
Identities = 890/892 (99%), Gaps = 2/892 (0%)
Strand = Plus / Minus
Query: 1 atcttgataatctattgccgctgcgcgtcaaaaatagtagcagtaagttctgcgtgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14613 atcttgataatctattgccgctgcgcgtcaaaaatagtagcagtaagttctgcgtgaggc 14554
Query: 61 ggacgttccgagactaaccaggacacactagattggtctattattctctcgtttgtaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14553 ggacgttccgagactaaccaggacacactagattggtctattattctctcgtttgtaagg 14494
Query: 121 caagcattaagacaaatctgggaggaaaaaatcttgatagcttggtggggttcgaactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14493 caagcattaagacaaatctgggaggaaaaaatcttgatagcttggtggggttcgaactac 14434
Query: 181 atagtaaaaatacgtcttttcttcttcaattacataattgagacaacgtcaggataccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14433 atagtaaaaatacgtcttttcttcttcaattacataattgagacaacgtcaggataccgg 14374
Query: 241 caaatttacgtaaaaataaaccggcagatattccgtagaagaatggatcgttaatcccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14373 caaatttacgtaaaaataaaccggcagatattccgtagaagaatggatcgttaatcccac 14314
Query: 301 agttagtcttctcgtcacttgtcataatgatccgtacaaacaaggcatgaaacaatggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14313 agttagtcttctcgtcacttgtcataatgatccgtacaaacaaggcatgaaacaatggct 14254
Query: 361 tgttattctacctcaagaagagatttcgggaaaaaacataagctcatcatttagtatgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14253 tgttattctacctcaagaagagatttcgggaaaaaacataagctcatcatttagtatgta 14194
Query: 421 cctgccgaaggcatacgtgatgacgggattggaatagtagttaccagttacaaactaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14193 cctgccgaaggcatacgtgatgacgggattggaatagtagttaccagttacaaactaatg 14134
Query: 481 ggactggggcctgccctctcgtactaaagtgatcgaagaagtcgttttggctgtgtgggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14133 ggactggggcctgccctctcgtactaaagtgatcgaagaagtcgttttggctgtgtgggc 14074
Query: 541 ctagaccttctggggagcctcacgccagcaccagactgcctggtctgtttttttcggcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14073 ctagaccttctggggagcctcacgccagcaccagactgcctggtctgtttttttcggcag 14014
Query: 601 gtaaatattatctttctgtacgaaccgagctggtgtcaatggacgacggaagattgcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14013 gtaaatattatctttctgtacgaaccgagctggtgtcaatggacgacggaagattgcact 13954
Query: 661 cccatagaccattctctggtgcaagggagagctgcattcatttcctttgtccctgacatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13953 cccatagaccattctctggtgcaagggagagctgcattcatttcctttgtccctgacatt 13894
Query: 721 agctaatccaaaaataactttattggaactccttcttcacagccatatttgatgtctcag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13893 agctaatccaaaaataactttattggaactccttcttcacagccatatttgatgtctcag 13834
Query: 781 tataactgcacagaacgcgt-ga-tttagaaatacaatgcacaggtccaggtcaataggg 838
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 13833 tataactgcacagaacgcgtagactttagaaatacaatgcacaggtccaggtcaataggg 13774
Query: 839 ttctccatgaaactttaagcctgcacaagataattgcttcctagcaagagct 890
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13773 ttctccatgaaactttaagcctgcacaagataattgcttcctagcaagagct 13722
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5413
Number of Sequences: 1807
Number of extensions: 5413
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)